Publications

Poivet, Gallot, Montagné, Senin, Monsempès, Legeai & Jacquin-Joly (2021)
, , , , , & (). Transcriptome profiling of starvation in the peripheral chemosensory organs of the crop pest Spodoptera littoralis caterpillars. Insects, 12(7). 573.
Aubé, Senin, Bonin, Pringault, Jeziorski, Bouchez, Klopp, Guyoneaud & Goñi-Urriza (2020)
, , , , , , , & (). Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning. Microbial Ecology. 1–10.
Senin, Lin, Wang, Oates, Gandhi, Boedihardjo, Chen & Frankenstein (2018)
, , , , , , & (). Grammarviz 3.0: Interactive discovery of variable-length time series patterns. ACM Transactions on Knowledge Discovery from Data (TKDD), 12(1). 1–28.
Forestier, Petitjean, Senin, Despinoy, Huaulmé, Fawaz, Weber, Idoumghar, Muller & Jannin (2018)
, , , , , , , , & (). Surgical motion analysis using discriminative interpretable patterns. Artificial intelligence in medicine, 91. 3–11.
Forestier, Petitjean, Senin, Riffaud, Henaux & Jannin (2017)
, , , , & (). Finding discriminative and interpretable patterns in sequences of surgical activities. Artificial Intelligence in Medicine, 82. 11–19.
Forestier, Petitjean, Senin, Despinoy & Jannin (2017)
, , , & (). Discovering discriminative and interpretable patterns for surgical motion analysis. Springer, Cham.
Chen, Boedihardjo, Jenkins, Ellison, Lin, Senin & Oates (2017)
, , , , , & (). STAVIS 2.0: Mining Spatial Trajectories via Motifs. Springer, Cham.
Chain, Davenport, Li, Lo, Xu, Senin, Shakya, Ahmed, Hamilton, Bishop-Lilly & others (2017)
, , , , , , , , , & (). EDGE 2017 R&D 100 Entry with Appendix. Los Alamos National Lab.(LANL), Los Alamos, NM (United States).
Chain, Lo, Li, Davenport, Xu, Ahmed, Senin, Shakya, Bishop-Lilly, Anderson & others (2017)
, , , , , , , , , & (). Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform, Version 1.5 and 1. x.. Los Alamos National Lab.(LANL), Los Alamos, NM (United States).
Wang, Lin, Senin, Oates, Gandhi, Boedihardjo, Chen & Frankenstein (2016)
, , , , , , & (). RPM: Representative Pattern Mining for Efficient Time Series Classification.
Aubé, Senin, Pringault, Bonin, Deflandre, Bouchez, Bru, Biritxinaga-Etchart, Klopp, Guyoneaud & others (2016)
, , , , , , , , , & (). The impact of long-term hydrocarbon exposure on the structure, activity, and biogeochemical functioning of microbial mats. Marine pollution bulletin, 111(1-2). 115–125.
Senin, Lin, Wang, Oates, Gandhi, Boedihardjo, Chen & Frankenstein (2015)
, , , , , , & (). Time series anomaly discovery with grammar-based compression.
Senin (2015)
(). Software Trajectory Analysis: An empirically based method for automated software process discovery. University of Hawai'i at Manoa.
Rupp, Senin, Sarry, Allain, Tasca, Ligat, Portes, Woloszyn, Bouchez, Tabouret & others (2015)
, , , , , , , , , & (). A Point Mutation in Suppressor of Cytokine Signalling 2 ( Socs2 ) Increases the Susceptibility to Inflammation of the Mammary Gland while Associated with Higher Body Weight and Size and Higher Milk Production in a Sheep Model. PLoS Genetics.
Rupp, Foucras, Senin, Sarry, Allain, Portes, Bouchez & Tosser-Klopp (2015)
, , , , , , & (). Identification et caractérisation d’une mutation dans le gène SOCS2 (Suppressor of Cytokine Signalling 2) associée à la sensibilité aux mammites chez les ovins laitiers. Institut de l'Elevage-INRA.
Pringault, Aube, Bouchez, Klopp, Mariette, Escudie, Senin & Goni-Urriza (2015)
, , , , , , & (). Contrasted effects of natural complex mixtures of PAHs and metals on oxygen cycle in a microbial mat. Chemosphere, 135. 189–201.
Gandhi, Oates, Boedihardjo, Chen, Lin, Senin, Frankenstein & Wang (2015)
, , , , , , & (). A generative model for time series discretization based on multiple normal distributions.
Senin, Lin, Wang, Oates, Gandhi, Boedihardjo, Chen, Frankenstein & Lerner (2014)
, , , , , , , & (). GrammarViz 2.0: A Tool for Grammar-Based Pattern Discovery in Time Series. Springer Berlin Heidelberg.
Otunba, Lin & Senin (2014)
, & (). MBPD: Motif-Based Period Detection. Springer International Publishing.
Senin & Malinchik (2013)
& (). SAX-VSM: Interpretable Time Series Classification Using SAX and Vector Space Model. IEEE.
Rupp, Senin, Sarry, Bouchez, Foucras & Tosser-Klopp (2013)
, , , , & (). Fine mapping of a QTL for mastitis resistance on OAR3 in Lacaune dairy sheep. Wageningen Academic Publishers.
Maza, Frasse, Senin, Bouzayen & Zouine (2013)
, , , & (). Comparison of normalization methods for differential gene expression analysis in RNA-Seq experiments: A matter of relative size of studied transcriptomes. Communicative & Integrative Biology, 6(6).
Senin (2012)
(). Recognizing recurrent development behaviors corresponding to Android OS release life-cycle.
Roustan & Senin (2012)
& (). La transition fruit immature/fruit mature: analyse globale des profils transcriptomiques.
Woyke, Xie, Copeland, González, Han, Kiss, Saw, Senin, Yang, Chatterji & others (2009)
, , , , , , , , , & (). Assembling the marine metagenome, one cell at a time. PLoS One, 4(4). e5299.
Johnson, Zhang & Senin (2009)
, & (). Experiences with hackystat as a service-oriented architecture. University of Hawaii, Honolulu.
Xie, Han, Kiss, Saw, Senin, Woyke, Copeland, Gonzalez, Chatterji, Cheng & others (2008)
, , , , , , , , , & (). Assembling the marine metagenome, one cell at a time. Los Alamos National Lab.(LANL), Los Alamos, NM (United States).
Woyke, Copeland, Xie, Han, Cheng, Kiss, Saw, Senin, Sieracki & Stepanauskas (2008)
, , , , , , , , & (). Single cell genome reconstruction of two uncultured, proteorhodopsin-containing Flavobacteria.
Senin (2008)
(). Dynamic time warping algorithm review. CSDL Technical report.
Ming, Hou, Feng, Yu, Dionne-Laporte, Saw, Senin, Wang, Ly, Lewis & others (2008)
, , , , , , , , , & (). The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature, 452(7190). 991–996.
SAW & SENIN (2008)
& (). Oral Pathogen Sequence Databases at Los Alamos National Laboratory.
Hou, Makarova, Saw, Senin, Ly, Zhou, Ren, Wang, Galperin, Omelchenko & others (2008)
, , , , , , , , , & (). Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia. Biology Direct, 3(1). 26.
Senin & Keane (2007)
& (). MCMC simulation of interstellar grain chemistry. UNIVERSITY OF HAWAII.
Dunfield, Yuryev, Senin, Smirnova, Stott, Hou, Ly, Saw, Zhou, Ren & others (2007)
, , , , , , , , , & (). Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature, 450(7171). 879–882.